Google_Service_Genomics_Reads_Resource Class Reference

The "reads" collection of methods. More...

Inheritance diagram for Google_Service_Genomics_Reads_Resource:

Public Member Functions
	call ($name, $arguments, $expected_class=null)
	TODO: This function needs simplifying.
	search (Google_Service_Genomics_SearchReadsRequest $postBody, $optParams=array())
	Gets a list of reads for one or more read group sets.

Protected Member Functions
	convertToArrayAndStripNulls ($o)

Detailed Description

The "reads" collection of methods.

Typical usage is: $genomicsService = new Google_Service_Genomics(...); $reads = $genomicsService->reads;

Member Function Documentation

call()

Google_Service_Resource::call ( $name, $arguments, $expected_class = null )

inherited

TODO: This function needs simplifying.

Parameters

$name
$arguments
$expected_class	- optional, the expected class name

Return values

Google_Http_Request|expected_class

Exceptions

Google_Exception

search()

Google_Service_Genomics_Reads_Resource::search	(	Google_Service_Genomics_SearchReadsRequest	$postBody,
			$optParams = array() )

Gets a list of reads for one or more read group sets.

Reads search operates over a genomic coordinate space of reference sequence & position defined over the reference sequences to which the requested read group sets are aligned. If a target positional range is specified, search returns all reads whose alignment to the reference genome overlap the range. A query which specifies only read group set IDs yields all reads in those read group sets, including unmapped reads. All reads returned (including reads on subsequent pages) are ordered by genomic coordinate (reference sequence & position). Reads with equivalent genomic coordinates are returned in a deterministic order. Implements GlobalAllianceApi.searchReads. (reads.search)

Parameters

Google_SearchReadsRequest	$postBody
array	$optParams	Optional parameters.

Return values

Google_Service_Genomics_SearchReadsResponse

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The documentation for this class was generated from the following file:

• lib/google/src/Google/Service/Genomics.php